1K83 | Transcription Toxin | date | Oct 22, 2001 |
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title | Crystal Structure Of Yeast Rna Polymerase II Complexed With Inhibitor Alpha Amanitin | ||||||||||||||
authors | D.A.Bushnell, P.Cramer, R.D.Kornberg | ||||||||||||||
compound | source | ||||||||||||||
Molecule: Dna-Directed Rna Polymerase II Largest Subunit Chain: A Synonym: Rpb1 Ec: 2.7.7.6 |
Organism_scientific: Saccharomyces Cerevisiae Organism_common: Baker'S Yeast Organism_taxid: 4932 Strain: Delta-Rpb4 | ||||||||||||||
Molecule: Dna-Directed Rna Polymerase II 140kd Polypeptide Chain: B Synonym: Rpb2 Ec: 2.7.7.6 |
Organism_scientific: Saccharomyces Cerevisiae Organism_common: Baker'S Yeast Organism_taxid: 4932 Strain: Delta-Rpb4 | ||||||||||||||
Molecule: Dna-Directed Rna Polymerase II 45kd Polypeptide Chain: C Synonym: Rpb3 Ec: 2.7.7.6 |
Organism_scientific: Saccharomyces Cerevisiae Organism_common: Baker'S Yeast Organism_taxid: 4932 Strain: Delta-Rpb4 | ||||||||||||||
Molecule: Dna-Directed Rna Polymerase II 27kd Polypeptide Chain: E Synonym: Rpb5 Ec: 2.7.7.6 |
Organism_scientific: Saccharomyces Cerevisiae Organism_common: Baker'S Yeast Organism_taxid: 4932 Strain: Delta-Rpb4 | ||||||||||||||
Molecule: Dna-Directed Rna Polymerase II 23kd Polypeptide Chain: F Synonym: Rpb6 Ec: 2.7.7.6 |
Organism_scientific: Saccharomyces Cerevisiae Organism_common: Baker'S Yeast Organism_taxid: 4932 Strain: Delta-Rpb4 | ||||||||||||||
Molecule: Dna-Directed Rna Polymerase II 14.5kd Polypeptide Chain: H Synonym: Rpb8 Ec: 2.7.7.6 |
Organism_scientific: Saccharomyces Cerevisiae Organism_common: Baker'S Yeast Organism_taxid: 4932 Strain: Delta-Rpb4 | ||||||||||||||
Molecule: Dna-Directed Rna Polymerase II 14.2kd Polypeptide Chain: I Synonym: Rpb9 Ec: 2.7.7.6 |
Organism_scientific: Saccharomyces Cerevisiae Organism_common: Baker'S Yeast Organism_taxid: 4932 Strain: Delta-Rpb4 | ||||||||||||||
Molecule: Dna-Directed Rna Polymerase II 8.3kd Polypeptide Chain: J Synonym: Rpb10 Ec: 2.7.7.6 |
Organism_scientific: Saccharomyces Cerevisiae Organism_common: Baker'S Yeast Organism_taxid: 4932 Strain: Delta-Rpb4 | ||||||||||||||
Molecule: Dna-Directed Rna Polymerase II 13.6kd Polypeptide Chain: K Synonym: Rpb11 Ec: 2.7.7.6 |
Organism_scientific: Saccharomyces Cerevisiae Organism_common: Baker'S Yeast Organism_taxid: 4932 Strain: Delta-Rpb4 | ||||||||||||||
Molecule: Dna-Directed Rna Polymerase II 7.7kd Polypeptide Chain: L Synonym: Rpb12 Ec: 2.7.7.6 |
Organism_scientific: Saccharomyces Cerevisiae Organism_common: Baker'S Yeast Organism_taxid: 4932 Strain: Delta-Rpb4 | ||||||||||||||
Molecule: Alpha Amanitin Chain: M Synonym: Amatoxin |
Organism_scientific: Amanita Phalloides Organism_taxid: 67723 | ||||||||||||||
symmetry | Space Group: I 2 2 2 |
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crystal cell |
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method | X-Ray Diffraction | resolution | 2.80 Å | ||||||||||||
ligand | CSX, HYP, ILX, MN, TRX, ZN | enzyme | Transferase E.C.2.7.7.6 BRENDA | ||||||||||||
note | 1K83 (Molecule of the Month:pdb40) | ||||||||||||||
related structures | by homologous chain: 1I50, 1TWC, 1TWF | ||||||||||||||
Gene Ontology | |||||||||||||||
Primary reference | Structural basis of transcription: alpha-amanitin-RNA polymerase II cocrystal at 2.8 A resolution., Bushnell DA, Cramer P, Kornberg RD, Proc Natl Acad Sci U S A 2002 Feb 5;99(3):1218-22. PMID:11805306 |
Data retrieval |
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Visual 3D analysis of 1K83 |
Structure-derived information |
- Domain d1k83a_, region A [Jmol] [rasmolscript] [script source] - Domain d1k83b_, region B [Jmol] [rasmolscript] [script source] - Domain d1k83c1, region C:3-41,C:173-268 [Jmol] [rasmolscript] [script source] - Domain d1k83c2, region C:42-172 [Jmol] [rasmolscript] [script source] - Domain d1k83e2, region E:144-215 [Jmol] [rasmolscript] [script source] - Domain d1k83e1, region E:3-143 [Jmol] [rasmolscript] [script source] - Domain d1k83f_, region F [Jmol] [rasmolscript] [script source] - Domain d1k83h_, region H [Jmol] [rasmolscript] [script source] - Domain d1k83i1, region I:1-49 [Jmol] [rasmolscript] [script source] - Domain d1k83i2, region I:50-122 [Jmol] [rasmolscript] [script source] - Domain d1k83j_, region J [Jmol] [rasmolscript] [script source] - Domain d1k83k_, region K [Jmol] [rasmolscript] [script source] - Domain d1k83l_, region L [Jmol] [rasmolscript] [script source] |
Sequence-derived information |
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