1K8A date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand CAI, CD, CL, K, MG, NA enzyme
related structures by homologous chain: 1KD1, 1Q86
Gene
Ontology
ChainFunctionProcessComponent
1


2


3


4


C


D


E


F


G


H
  • ribonuclease P activity


    • I


    J


    K


    L


    M


    N


    O


    P


    Q


    R


    S


    T


    U


    V


    W


    X


    Y


    Z


    Primary referenceThe structures of four macrolide antibiotics bound to the large ribosomal subunit., Hansen JL, Ippolito JA, Ban N, Nissen P, Moore PB, Steitz TA, Mol Cell 2002 Jul;10(1):117-28. PMID:12150912
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (1964 Kb) [Save to disk]
  • Biological Unit Coordinates (1k8a.pdb1.gz) 1930 Kb
  • LPC: Ligand-Protein Contacts for 1K8A
  • CSU: Contacts of Structural Units for 1K8A
  • Likely Quarternary Molecular Structure file(s) for 1K8A
  • Structure Factors (5137 Kb)
  • Retrieve 1K8A in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1K8A from S2C, [Save to disk]
  • Re-refined 1k8a structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 1K8A in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1k8a_V] [1k8a_W] [1k8a_X] [1k8a_Y] [1k8a_Z] [1k8a] [1k8a_1] [1k8a_2] [1k8a_3] [1k8a_4] [1k8a_A] [1k8a_B] [1k8a_C] [1k8a_D] [1k8a_E] [1k8a_F] [1k8a_G] [1k8a_H] [1k8a_I] [1k8a_J] [1k8a_K] [1k8a_L] [1k8a_M] [1k8a_N] [1k8a_O] [1k8a_P] [1k8a_Q] [1k8a_R] [1k8a_S] [1k8a_T] [1k8a_U]
  • SWISS-PROT database: [P60617] [P29198] [P22450] [P60618] [P12737] [P12733] [P14123] [P14119] [P12734] [P10970] [P12732] [P14116] [P10972] [P10971] [P20276] [P14121] [P18138] [P12736] [P60619] [P32410] [P22452] [P20279] [P32411] [P12735] [P14124] [P14135] [P12743] [P15825]
  • Domains found in 1K8A: [HhH1] [KOW] [Ribosomal_L14] [Ribosomal_L15e] [Ribosomal_L19e] [Ribosomal_L2] [Ribosomal_L2_C] [Ribosomal_L31e] [Ribosomal_L32e] [TRASH ] by SMART

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