1KB4 date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand ZN enzyme
related structures by homologous chain: 1KB2, 1YNW
Gene
Ontology
ChainFunctionProcessComponent
B, A


Primary referenceStructural basis of VDR-DNA interactions on direct repeat response elements., Shaffer PL, Gewirth DT, EMBO J 2002 May 1;21(9):2242-52. PMID:11980721
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (51 Kb) [Save to disk]
  • Biological Unit Coordinates (1kb4.pdb1.gz) 45 Kb
  • LPC: Ligand-Protein Contacts for 1KB4
  • CSU: Contacts of Structural Units for 1KB4
  • Likely Quarternary Molecular Structure file(s) for 1KB4
  • Structure Factors (126 Kb)
  • Retrieve 1KB4 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1KB4 from S2C, [Save to disk]
  • Re-refined 1kb4 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1KB4 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1kb4] [1kb4_A] [1kb4_B] [1kb4_C] [1kb4_D]
  • SWISS-PROT database: [P11473]
  • Belongs to the vitamin d3 receptor (vdr) family according to TCDB.
  • Domain found in 1KB4: [ZnF_C4 ] by SMART

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