1KWR Lyase date Jan 30, 2002
title Human Carbonic Anhydrase II Complexed With Inhibitor 0134-36
authors S.Grueneberg, M.T.Stubbs
compound source
Molecule: Carbonic Anhydrase II
Chain: A
Synonym: Carbonate Dehydratase II, Ca-II
Ec: 4.2.1.1
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
symmetry Space Group: P 1 21 1
R_factor 0.196 R_Free 0.269
crystal
cell
length a length b length c angle alpha angle beta angle gamma
42.560 41.400 72.340 90.00 104.40 90.00
method X-Ray Diffractionresolution 2.25 Å
ligand SG2, ZN BindingDB enzyme Lyase E.C.4.2.1.1 BRENDA
related structures by homologous chain: 1CVE, 1HVA
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceSuccessful virtual screening for novel inhibitors of human carbonic anhydrase: strategy and experimental confirmation., Gruneberg S, Stubbs MT, Klebe G, J Med Chem 2002 Aug 15;45(17):3588-602. PMID:12166932
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (50 Kb) [Save to disk]
  • Biological Unit Coordinates (1kwr.pdb1.gz) 46 Kb
  • LPC: Ligand-Protein Contacts for 1KWR
  • CSU: Contacts of Structural Units for 1KWR
  • Likely Quarternary Molecular Structure file(s) for 1KWR
  • Structure Factors (83 Kb)
  • Retrieve 1KWR in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1KWR from S2C, [Save to disk]
  • Re-refined 1kwr structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1KWR in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1KWR
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1KWR, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1kwra_, region A [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1kwr_A] [1kwr]
  • SWISS-PROT database: [P00918]
  • Domain organization of [CAH2_HUMAN] by SWISSPFAM
  • Domain found in 1KWR: [Carb_anhydrase ] by SMART
  • Other resources with information on 1KWR
  • Community annotation for 1KWR at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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