1LLM	Transcription Dna	date	Apr 29, 2002
title	Crystal Structure Of A Zif23-Gcn4 Chimera Bound To Dna
authors	S.A.Wolfe, R.A.Grant, C.O.Pabo
compound		source
Molecule: 5'-D(Tpcpcpcpapcpgpcpgptpgpgpg)-3' Chain: A, B Engineered: Yes		Synthetic: Yes
Molecule: Chimera Of Zif23-Gcn4 Chain: C, D Engineered: Yes Other_details: The Zif23 Section Of The Chimera Is Residues Is Derived From Zif268. The Gcn4 Section Is Residues 60-88.		Organism_scientific: Mus Musculus, Saccharomyces Cerevisiae Organism_common: House Mouse, Baker'S Yeast Organism_taxid: 10090, 4932 Strain: , Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Bl21 De3 Plyss Expression_system_vector_type: Plasmid Expression_system_plasmid: Pet21d
symmetry	Space Group: P 31 2 1	R_factor 0.216 R_Free 0.234
crystal cell	length a length b length c angle alpha angle beta angle gamma 87.398 87.398 118.693 90.00 90.00 120.00
method	X-Ray Diffraction	resolution	1.50 Å
ligand	ZN	enzyme
related structures	by homologous chain: 1A1I, 2BNI
Primary reference	Structure of a designed dimeric zinc finger protein bound to DNA., Wolfe SA, Grant RA, Pabo CO, Biochemistry. 2003 Nov 25;42(46):13401-9. PMID:14621985

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (52 Kb) [Save to disk] Biological Unit Coordinates (1llm.pdb1.gz) 47 Kb LPC: Ligand-Protein Contacts for 1LLM CSU: Contacts of Structural Units for 1LLM Likely Quarternary Molecular Structure file(s) for 1LLM Retrieve 1LLM in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1LLM from S2C, [Save to disk]

View 1LLM in 3D

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Visual 3D analysis of 1LLM

Cartoon representation from PDB Cartoon Ramachandran plot from PDBSum

Structure-derived information

Conformational Epitope Prediction for 1LLM 1LLMA 1LLMB 1LLMC 1LLMD from the CEP Server. Dipole moment, from Dipole Server at Weizmann Institute Crystal Contacts, from CryCo at Weizmann Institute 3D motif for 1LLM, from MSDmotif at EBI Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1llmc1, region C:101-128 [Jmol] [rasmolscript] [script source]     - Domain d1llmc2, region C:129-156 [Jmol] [rasmolscript] [script source]     - Domain d1llmd1, region D:201-228 [Jmol] [rasmolscript] [script source]     - Domain d1llmd2, region D:229-256 [Jmol] [rasmolscript] [script source] Fold representative 1llm from FSSP and Dali (Families of Structurally Similar Proteins) Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH Summaries and structural analyses of PDB data files from PDBSum Identification of Protein Pockets & Cavities at CASTp

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1llm_D] [1llm] [1llm_C] [1llm_B] [1llm_A] SWISS-PROT database: [P08046] [P03069] Domain organization of [EGR1_MOUSE] [GCN4_YEAST] by SWISSPFAM Domain found in 1LLM: [ZnF_C2H2 ] by SMART

Other resources with information on 1LLM

Community annotation for 1LLM at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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