OCA Atlas for 1LQM

1LQM

date

authors

compound

source

symmetry

R_factor

R_Free

crystal
cell

length a	length b	length c	angle alpha	angle beta	angle gamma

method

X-Ray Diffraction

resolution

Gene
Ontology

Chain	Function	Process	Component
D, H, B, F
E, C, G, A

Primary reference

Domain closure and action of uracil DNA glycosylase (UDG): structures of new crystal forms containing the Escherichia coli enzyme and a comparative study of the known structures involving UDG., Saikrishnan K, Bidya Sagar M, Ravishankar R, Roy S, Purnapatre K, Handa P, Varshney U, Vijayan M, Acta Crystallogr D Biol Crystallogr 2002 Aug;58(Pt 8):1269-76. PMID:12136137

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (184 Kb) [Save to disk]

Biological Unit Coordinates (1lqm.pdb1.gz) 47 Kb

Biological Unit Coordinates (1lqm.pdb2.gz) 48 Kb

Biological Unit Coordinates (1lqm.pdb3.gz) 47 Kb

Biological Unit Coordinates (1lqm.pdb4.gz) 48 Kb

CSU: Contacts of Structural Units for 1LQM

Likely Quarternary Molecular Structure file(s) for 1LQM

Structure Factors (227 Kb)

Retrieve 1LQM in mmCIF format [Save to disk]

SEQRES to COORDINATES correlation for 1LQM from S2C, [Save to disk]

Re-refined 1lqm structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 1LQM in 3D

Proteopedia, because life has more than 2D.

On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.

On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1lqm_G] [1lqm_F] [1lqm_H] [1lqm] [1lqm_A] [1lqm_B] [1lqm_C] [1lqm_D] [1lqm_E]

SWISS-PROT database: [P14739] [P12295]

Domains found in 1LQM: [UDG] [UreE_C ] by SMART

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