1LYA		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	BMA, MAN, NAG	enzyme
related structures	by homologous chain: 1LYB, 1LYW
Gene Ontology	Chain Function Process Component C, D, A, B
Primary reference	Crystal structures of native and inhibited forms of human cathepsin D: implications for lysosomal targeting and drug design., Baldwin ET, Bhat TN, Gulnik S, Hosur MV, Sowder RC 2nd, Cachau RE, Collins J, Silva AM, Erickson JW, Proc Natl Acad Sci U S A 1993 Jul 15;90(14):6796-800. PMID:8393577

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (137 Kb) [Save to disk] Biological Unit Coordinates (1lya.pdb1.gz) 67 Kb Biological Unit Coordinates (1lya.pdb2.gz) 67 Kb LPC: Ligand-Protein Contacts for 1LYA CSU: Contacts of Structural Units for 1LYA Likely Quarternary Molecular Structure file(s) for 1LYA Retrieve 1LYA in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1LYA from S2C, [Save to disk]

View 1LYA in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1lya] [1lya_A] [1lya_B] [1lya_C] [1lya_D] SWISS-PROT database: [P07339]

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