1M1E Structural Protein date Jun 18, 2002
title Beta-Catenin Armadillo Repeat Domain Bound To Icat
authors D.L.Daniels, W.I.Weis
compound source
Molecule: Beta-Catenin
Chain: A
Fragment: Armadillo Repeat Region (Residues 134-671)
Engineered: Yes
Organism_scientific: Mus Musculus
Organism_common: House Mouse
Organism_taxid: 10090
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Topp3
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pgex-4t

Molecule: Icat
Chain: B
Engineered: Yes

Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Escherichia Coli Bl21
Expression_system_taxid: 511693
Expression_system_strain: Bl21
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pgex-4t
symmetry Space Group: P 21 21 2
R_factor 0.202 R_Free 0.228
crystal
cell
length a length b length c angle alpha angle beta angle gamma
97.750 97.320 86.820 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.10 Å
note 1M1E is a representative structure
related structures by homologous chain: 1I7W, 1T08
Gene
Ontology
ChainFunctionProcessComponent
A


B


Primary referenceICAT inhibits beta-catenin binding to Tcf/Lef-family transcription factors and the general coactivator p300 using independent structural modules., Daniels DL, Weis WI, Mol Cell 2002 Sep;10(3):573-84. PMID:12408825
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (97 Kb) [Save to disk]
  • Biological Unit Coordinates (1m1e.pdb1.gz) 93 Kb
  • CSU: Contacts of Structural Units for 1M1E
  • Likely Quarternary Molecular Structure file(s) for 1M1E
  • Structure Factors (432 Kb)
  • Retrieve 1M1E in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1M1E from S2C, [Save to disk]
  • Re-refined 1m1e structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1M1E in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1M1E
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1M1E, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1m1ea_, region A [Jmol] [rasmolscript] [script source]
        - Domain d1m1eb_, region B [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1m1e_B] [1m1e] [1m1e_A]
  • SWISS-PROT database: [Q9NSA3] [Q02248]
  • Domain organization of [CNBP1_HUMAN] [CTNB1_MOUSE] by SWISSPFAM
  • Domain found in 1M1E: [ARM ] by SMART
  • Other resources with information on 1M1E
  • Community annotation for 1M1E at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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