1MH1 Gtp-Binding date Jan 21, 1997
title Small G-Protein
authors M.Hirshberg, R.W.Stockley, G.Dodson, M.R.Webb
compound source
Molecule: Rac1
Chain: A
Fragment: Residues 1 - 184
Engineered: Yes
Mutation: Yes
Other_details: Complexed With Guanosine-5'-(Beta,Gamma-Imid Triphosphate (Gppnp)
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Rho
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_gene: Rho
symmetry Space Group: P 21 21 2
R_factor 0.175 R_Free 0.205
crystal
cell
length a length b length c angle alpha angle beta angle gamma
46.440 103.050 43.673 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.38 Å
ligand GNP, MG enzyme
related structures by homologous chain: 1RYH
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceThe crystal structure of human rac1, a member of the rho-family complexed with a GTP analogue., Hirshberg M, Stockley RW, Dodson G, Webb MR, Nat Struct Biol 1997 Feb;4(2):147-52. PMID:9033596
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (39 Kb) [Save to disk]
  • Biological Unit Coordinates (1mh1.pdb1.gz) 34 Kb
  • LPC: Ligand-Protein Contacts for 1MH1
  • CSU: Contacts of Structural Units for 1MH1
  • Likely Quarternary Molecular Structure file(s) for 1MH1
  • Retrieve 1MH1 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1MH1 from S2C, [Save to disk]
  • View 1MH1 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1MH1
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Conformational Epitope Prediction for 1MH1 from the CEP Server.
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1MH1, from MSDmotif at EBI
  • Genome occurence of 1MH1's fold from GeneCensus
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1mh1__, region [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1mh1_A] [1mh1]
  • SWISS-PROT database: [P63000]
  • Domain organization of [RAC1_HUMAN] by SWISSPFAM
  • Domain found in 1MH1: [RHO ] by SMART
  • Other resources with information on 1MH1
  • Community annotation for 1MH1 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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