1MTS Serine Proteinase date May 16, 1997
title Factor Xa Specific Inhibitor In Complex With Bovine Trypsin
authors M.T.Stubbs
compound source
Molecule: Trypsin
Chain: A
Ec: 3.4.21.4
 Organism_scientific: Bos Taurus
Organism_common: Cattle
Organism_taxid: 9913
symmetry Space Group: P 21 21 21
R_factor 0.179 R_Free NULL
crystal
cell
length a length b length c angle alpha angle beta angle gamma
63.300 69.300 63.800 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.90 Å
ligand BX3, CA enzyme Hydrolase E.C.3.4.21.4 BRENDA
related structures by homologous chain: 1MTU, 2PTC
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceCrystal structures of factor Xa specific inhibitors in complex with trypsin: structural grounds for inhibition of factor Xa and selectivity against thrombin., Stubbs MT, Huber R, Bode W, FEBS Lett 1995 Nov 13;375(1-2):103-7. PMID:7498454
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (43 Kb) [Save to disk]
  • Biological Unit Coordinates (1mts.pdb1.gz) 39 Kb
  • LPC: Ligand-Protein Contacts for 1MTS
  • CSU: Contacts of Structural Units for 1MTS
  • Likely Quarternary Molecular Structure file(s) for 1MTS
  • Structure Factors (210 Kb)
  • Retrieve 1MTS in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1MTS from S2C, [Save to disk]
  • Re-refined 1mts structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 1MTS in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1MTS
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1MTS, from MSDmotif at EBI
  • Genome occurence of 1MTS's fold from GeneCensus
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1mts__, region [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1mts_A] [1mts]
  • SWISS-PROT database: [P00760]
  • Domain organization of [TRY1_BOVIN] by SWISSPFAM
  • Domain found in 1MTS: [Tryp_SPc ] by SMART
    • Other resources with information on 1MTS
  • Community annotation for 1MTS at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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