1MUU	Oxidoreductase	date	Sep 24, 2002
title	2.0 A Crystal Structure Of Gdp-Mannose Dehydrogenase
authors	C.F.Snook, P.A.Tipton, L.J.Beamer
compound		source
Molecule: Gdp-Mannose 6-Dehydrogenase Chain: A, B, C, D Synonym: Gmd Ec: 1.1.1.132 Engineered: Yes		Organism_scientific: Pseudomonas Aeruginosa Organism_taxid: 287 Gene: Algd Expression_system: Escherichia Coli Bl21(De3) Expression_system_taxid: 469008 Expression_system_strain: Bl21(De3) Expression_system_vector_type: Plasmid Expression_system_plasmid: Pet-3a
symmetry	Space Group: P 43	R_factor 0.209 R_Free 0.234
crystal cell	length a length b length c angle alpha angle beta angle gamma 82.497 82.497 310.173 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.02 Å
ligand	FRU, GDX, GLC, MSE, NAD	enzyme	Oxidoreductase E.C.1.1.1.132 BRENDA
related structures	by homologous chain: 1MFZ, 1MV8
Gene Ontology	Chain Function Process Component A, D, C, B
Primary reference	Crystal structure of GDP-mannose dehydrogenase: a key enzyme of alginate biosynthesis in P. aeruginosa., Snook CF, Tipton PA, Beamer LJ, Biochemistry. 2003 Apr 29;42(16):4658-68. PMID:12705829

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (283 Kb) [Save to disk] Biological Unit Coordinates (1muu.pdb1.gz) 138 Kb Biological Unit Coordinates (1muu.pdb2.gz) 140 Kb LPC: Ligand-Protein Contacts for 1MUU CSU: Contacts of Structural Units for 1MUU Likely Quarternary Molecular Structure file(s) for 1MUU Retrieve 1MUU in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1MUU from S2C, [Save to disk]

View 1MUU in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1MUU

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1MUU, from MSDmotif at EBI Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1muua2, region A:1-202 [Jmol] [rasmolscript] [script source]     - Domain d1muua1, region A:203-300 [Jmol] [rasmolscript] [script source]     - Domain d1muua3, region A:301-436 [Jmol] [rasmolscript] [script source]     - Domain d1muub2, region B:1-202 [Jmol] [rasmolscript] [script source]     - Domain d1muub1, region B:203-300 [Jmol] [rasmolscript] [script source]     - Domain d1muub3, region B:301-436 [Jmol] [rasmolscript] [script source]     - Domain d1muuc2, region C:1-202 [Jmol] [rasmolscript] [script source]     - Domain d1muuc1, region C:203-300 [Jmol] [rasmolscript] [script source]     - Domain d1muuc3, region C:301-436 [Jmol] [rasmolscript] [script source]     - Domain d1muud2, region D:1-202 [Jmol] [rasmolscript] [script source]     - Domain d1muud1, region D:203-300 [Jmol] [rasmolscript] [script source]     - Domain d1muud3, region D:301-436 [Jmol] [rasmolscript] [script source] Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH Summaries and structural analyses of PDB data files from PDBSum Identification of Protein Pockets & Cavities at CASTp

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1muu_A] [1muu] [1muu_B] [1muu_D] [1muu_C] SWISS-PROT database: [P11759] Domain organization of [ALGD_PSEAE] by SWISSPFAM Domain found in 1MUU: [UDPG_MGDP_dh_C ] by SMART

Other resources with information on 1MUU

Community annotation for 1MUU at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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