OCA Atlas for 1NFV

1NFV

date

authors

compound

source

symmetry

R_factor

R_Free

crystal
cell

length a	length b	length c	angle alpha	angle beta	angle gamma

method

X-Ray Diffraction

resolution

ligand

3PY, FE, FEC, GOL, SO4

enzyme

related structures

by homologous chain: 1NF4

Gene
Ontology

Chain	Function	Process	Component
O, M, L, A, N, G, P, K, B, E, H, D, F, I, C, J

Primary reference

The nature of the di-iron site in the bacterioferritin from Desulfovibrio desulfuricans., Macedo S, Romao CV, Mitchell E, Matias PM, Liu MY, Xavier AV, LeGall J, Teixeira M, Lindley P, Carrondo MA, Nat Struct Biol 2003 Apr;10(4):285-90. PMID:12627224

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (520 Kb) [Save to disk]

Biological Unit Coordinates (1nfv.pdb1.gz) 500 Kb

Biological Unit Coordinates (1nfv.pdb2.gz) 743 Kb

Biological Unit Coordinates (1nfv.pdb3.gz) 750 Kb

LPC: Ligand-Protein Contacts for 1NFV

CSU: Contacts of Structural Units for 1NFV

Likely Quarternary Molecular Structure file(s) for 1NFV

Structure Factors (2638 Kb)

Retrieve 1NFV in mmCIF format [Save to disk]

SEQRES to COORDINATES correlation for 1NFV from S2C, [Save to disk]

Re-refined 1nfv structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 1NFV in 3D

Proteopedia, because life has more than 2D.

On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.

On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1nfv_L] [1nfv_M] [1nfv_N] [1nfv_O] [1nfv_P] [1nfv] [1nfv_A] [1nfv_B] [1nfv_C] [1nfv_D] [1nfv_E] [1nfv_F] [1nfv_G] [1nfv_H] [1nfv_I] [1nfv_J] [1nfv_K]

SWISS-PROT database: [Q93PP9]

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