1NGF Hydrolase(Acting On Acid Anhydrides) date May 17, 1994
title Structural Basis Of The 70-Kilodalton Heat Shock Cognate Protein Atp Hydrolytic Activity, II. Structure Of The Active Site With Adp Or Atp Bound To Wild Type And Mutant Atpase Fragment
authors K.M.Flaherty, S.M.Wilbanks, C.Deluca-Flaherty, D.B.Mckay
compound source
Molecule: Heat-Shock Cognate 70 Kd Protein
Chain: A
Ec: 3.6.1.3
Engineered: Yes
 Organism_scientific: Bos Taurus
Organism_common: Cattle
Organism_taxid: 9913
Organ: Brain
symmetry Space Group: P 21 21 21
R_factor 0.185 R_Free NULL
crystal
cell
length a length b length c angle alpha angle beta angle gamma
145.300 65.000 46.900 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.17 Å
ligand ATP enzyme Hydrolase E.C.3.6.1.3 BRENDA
related structures by homologous chain: 1NGA, 1NGB
Primary referenceStructural basis of the 70-kilodalton heat shock cognate protein ATP hydrolytic activity. II. Structure of the active site with ADP or ATP bound to wild type and mutant ATPase fragment., Flaherty KM, Wilbanks SM, DeLuca-Flaherty C, McKay DB, J Biol Chem 1994 Apr 29;269(17):12899-907. PMID:8175707
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (68 Kb) [Save to disk]
  • Biological Unit Coordinates (1ngf.pdb1.gz) 65 Kb
  • LPC: Ligand-Protein Contacts for 1NGF
  • CSU: Contacts of Structural Units for 1NGF
  • Likely Quarternary Molecular Structure file(s) for 1NGF
  • Retrieve 1NGF in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1NGF from S2C, [Save to disk]
    • View 1NGF in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1NGF
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1NGF, from MSDmotif at EBI
  • Genome occurence of 1NGF's fold from GeneCensus
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1ngf_2, region 189-384 [Jmol] [rasmolscript] [script source]
        - Domain d1ngf_1, region 3-188 [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1ngf_A] [1ngf]
  • SWISS-PROT database: [P19120]
  • Domain organization of [HSP7C_BOVIN] by SWISSPFAM
    • Other resources with information on 1NGF
  • Community annotation for 1NGF at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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