1NNS Hydrolase date Jan 14, 2003
title L-Asparaginase Of E. Coli In C2 Space Group And 1.95 A Resol
authors M.Sanches, J.A.R.G.Barbosa, R.T.De Oliveira, J.A.A.Neto, I.Polik
compound source
Molecule: L-Asparaginase II
Chain: A, B
Synonym: L-Asparagine Amidohydrolase II
Ec: 3.5.1.1
Organism_scientific: Escherichia Coli
Organism_taxid: 562
symmetry Space Group: C 1 2 1
R_factor 0.130 R_Free 0.171
crystal
cell
length a length b length c angle alpha angle beta angle gamma
76.296 134.617 64.867 90.00 110.51 90.00
method X-Ray Diffractionresolution 1.95 Å
ligand ASP enzyme Hydrolase E.C.3.5.1.1 BRENDA
related structures by homologous chain: 4ECA
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceStructural comparison of Escherichia coli L-asparaginase in two monoclinic space groups., Sanches M, Barbosa J JA, De Oliveira RT, Abrahao Neto J, Polikarpov I, Acta Crystallogr D Biol Crystallogr 2003 Mar;59(Pt 3):416-22. PMID:12595697
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (108 Kb) [Save to disk]
  • Biological Unit Coordinates (1nns.pdb1.gz) 202 Kb
  • LPC: Ligand-Protein Contacts for 1NNS
  • CSU: Contacts of Structural Units for 1NNS
  • Likely Quarternary Molecular Structure file(s) for 1NNS
  • Structure Factors (564 Kb)
  • Retrieve 1NNS in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1NNS from S2C, [Save to disk]
  • Re-refined 1nns structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1NNS in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1NNS
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1NNS, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1nnsa_, region A [Jmol] [rasmolscript] [script source]
        - Domain d1nnsb_, region B [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1nns] [1nns_B] [1nns_A]
  • SWISS-PROT database: [P00805]
  • Domain organization of [ASPG2_ECOLI] by SWISSPFAM
  • Domain found in 1NNS: [Asparaginase ] by SMART
  • Other resources with information on 1NNS
  • Community annotation for 1NNS at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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