1NUH Isomerase date Jan 31, 2003
title The Crystal Structure Of Human Phosphoglucose Isomerase Comp 5-Phosphoarabinonate
authors C.Davies
compound source
Molecule: Glucose Phosphate Isomerase
Chain: A
Synonym: Phosphoglucose Isomerase
Ec: 5.3.1.9
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Gpi
Expression_system: Escherichia Coli Bl21
Expression_system_taxid: 511693
Expression_system_strain: Bl21
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet5a
symmetry Space Group: P 43 21 2
R_factor 0.214 R_Free 0.268
crystal
cell
length a length b length c angle alpha angle beta angle gamma
94.400 94.400 137.100 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.51 Å
ligand PA5, SO4 enzyme Isomerase E.C.5.3.1.9 BRENDA
related structures by homologous chain: 1DQR
Gene
Ontology
ChainFunctionProcessComponent
A
  • cytokine activity
  • growth factor activity


  • Primary referenceThe structure of human phosphoglucose isomerase complexed with a transition-state analogue., Davies C, Muirhead H, Chirgwin J, Acta Crystallogr D Biol Crystallogr 2003 Jun;59(Pt 6):1111-3. PMID:12777791
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (97 Kb) [Save to disk]
  • Biological Unit Coordinates (1nuh.pdb1.gz) 179 Kb
  • LPC: Ligand-Protein Contacts for 1NUH
  • CSU: Contacts of Structural Units for 1NUH
  • Likely Quarternary Molecular Structure file(s) for 1NUH
  • Structure Factors (193 Kb)
  • Retrieve 1NUH in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1NUH from S2C, [Save to disk]
  • Re-refined 1nuh structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1NUH in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1NUH
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1NUH, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1nuha_, region A [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1nuh_A] [1nuh]
  • SWISS-PROT database: [P06744]
  • Domain organization of [G6PI_HUMAN] by SWISSPFAM
  • Other resources with information on 1NUH
  • Community annotation for 1NUH at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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