1OAC Oxidoreductase date Sep 27, 1995
title Crystal Structure Of A Quinoenzyme: Copper Amine Oxidase Of Escherichia Coli At 2 Angstroems Resolution
authors M.R.Parsons, M.A.Convery, C.M.Wilmot, S.E.V.Phillips
compound source
Molecule: Copper Amine Oxidase
Chain: A, B
Ec: 1.4.3.6
Organism_scientific: Escherichia Coli
Organism_taxid: 562
Cellular_location: Periplasm
symmetry Space Group: P 21 21 21
R_factor
R_Free NULL
crystal
cell
length a length b length c angle alpha angle beta angle gamma
135.732 167.775 81.904 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.00 Å
ligand CA, CU, TPQ enzyme Oxidoreductase E.C.1.4.3.6 BRENDA
related structures by homologous chain: 1QAK
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceCrystal structure of a quinoenzyme: copper amine oxidase of Escherichia coli at 2 A resolution., Parsons MR, Convery MA, Wilmot CM, Yadav KD, Blakeley V, Corner AS, Phillips SE, McPherson MJ, Knowles PF, Structure 1995 Nov 15;3(11):1171-84. PMID:8591028
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (257 Kb) [Save to disk]
  • Biological Unit Coordinates (1oac.pdb1.gz) 250 Kb
  • LPC: Ligand-Protein Contacts for 1OAC
  • CSU: Contacts of Structural Units for 1OAC
  • Likely Quarternary Molecular Structure file(s) for 1OAC
  • Structure Factors (2112 Kb)
  • Retrieve 1OAC in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1OAC from S2C, [Save to disk]
  • Re-refined 1oac structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1OAC in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1OAC
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 1OAC, from MSDmotif at EBI
  • Genome occurence of 1OAC's fold from GeneCensus
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1oaca3, region A:186-300 [Jmol] [rasmolscript] [script source]
        - Domain d1oaca1, region A:301-724 [Jmol] [rasmolscript] [script source]
        - Domain d1oaca4, region A:5-90 [Jmol] [rasmolscript] [script source]
        - Domain d1oaca2, region A:91-185 [Jmol] [rasmolscript] [script source]
        - Domain d1oacb3, region B:186-300 [Jmol] [rasmolscript] [script source]
        - Domain d1oacb1, region B:301-727 [Jmol] [rasmolscript] [script source]
        - Domain d1oacb4, region B:5-90 [Jmol] [rasmolscript] [script source]
        - Domain d1oacb2, region B:91-185 [Jmol] [rasmolscript] [script source]
  • Fold representative 1oac from FSSP and Dali (Families of Structurally Similar Proteins)
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1oac_A] [1oac_B] [1oac]
  • SWISS-PROT database: [P46883]
  • Domain organization of [AMO_ECOLI] by SWISSPFAM
  • Other resources with information on 1OAC
  • Community annotation for 1OAC at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Domain movements in 1OAC from the Database of Macromolecular Movements.
  • Images from IMB Jena Image Library of Biological Macromolecules.

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