1OD5		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	CO3, MG	enzyme
Gene Ontology	Chain Function Process Component A, B
Primary reference	Crystal structure of soybean 11S globulin: glycinin A3B4 homohexamer., Adachi M, Kanamori J, Masuda T, Yagasaki K, Kitamura K, Mikami B, Utsumi S, Proc Natl Acad Sci U S A. 2003 Jun 10;100(12):7395-400. Epub 2003 May 27. PMID:12771376

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (131 Kb) [Save to disk] Biological Unit Coordinates (1od5.pdb1.gz) 368 Kb LPC: Ligand-Protein Contacts for 1OD5 CSU: Contacts of Structural Units for 1OD5 Likely Quarternary Molecular Structure file(s) for 1OD5 Structure Factors (353 Kb) Retrieve 1OD5 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1OD5 from S2C, [Save to disk] Re-refined 1od5 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 1OD5 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1od5] [1od5_A] [1od5_B] SWISS-PROT database: [P04347] Belongs to the soybean glycinin-derived pore-forming peptide (sgpp) family according to TCDB. Domain found in 1OD5: [Cupin_1 ] by SMART

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