1OQW Cell Adhesion date Mar 11, 2003
title Full-Length Pak Pilin From Pseudomonas Aeruginosa
authors L.Craig, A.S.Arvai, K.T.Forest, J.A.Tainer
compound source
Molecule: Fimbrial Protein
Chain: A, B
Synonym: Pilin, Strain Pak
Organism_scientific: Pseudomonas Aeruginosa
Organism_taxid: 287
Strain: K
symmetry Space Group: C 1 2 1
R_factor 0.223 R_Free 0.248
crystal
cell
length a length b length c angle alpha angle beta angle gamma
147.015 44.422 73.782 90.00 116.82 90.00
method X-Ray Diffractionresolution 2.00 Å
related structures by homologous chain: 1X6R
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceType IV pilin structure and assembly: X-ray and EM analyses of Vibrio cholerae toxin-coregulated pilus and Pseudomonas aeruginosa PAK pilin., Craig L, Taylor RK, Pique ME, Adair BD, Arvai AS, Singh M, Lloyd SJ, Shin DS, Getzoff ED, Yeager M, Forest KT, Tainer JA, Mol Cell 2003 May;11(5):1139-50. PMID:12769840
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (52 Kb) [Save to disk]
  • Biological Unit Coordinates (1oqw.pdb1.gz) 25 Kb
  • Biological Unit Coordinates (1oqw.pdb2.gz) 25 Kb
  • CSU: Contacts of Structural Units for 1OQW
  • Likely Quarternary Molecular Structure file(s) for 1OQW
  • Structure Factors (234 Kb)
  • Retrieve 1OQW in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1OQW from S2C, [Save to disk]
  • Re-refined 1oqw structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1OQW in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1OQW
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 1OQW, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1oqwa_, region A [Jmol] [rasmolscript] [script source]
        - Domain d1oqwb_, region B [Jmol] [rasmolscript] [script source]
  • Fold representative 1oqw from FSSP and Dali (Families of Structurally Similar Proteins)
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1oqw] [1oqw_B] [1oqw_A]
  • SWISS-PROT database: [P02973]
  • Domain organization of [FMPA_PSEAE] by SWISSPFAM
  • Other resources with information on 1OQW
  • Community annotation for 1OQW at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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