1OT1 date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand ACY, BGC, CA, EPE, GLC, MPD enzyme
related structures by homologous chain: 1KCL, 1PJ9
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceThe fully conserved Asp residue in conserved sequence region I of the alpha-amylase family is crucial for the catalytic site architecture and activity., Leemhuis H, Rozeboom HJ, Dijkstra BW, Dijkhuizen L, FEBS Lett 2003 Apr 24;541(1-3):47-51. PMID:12706817
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (132 Kb) [Save to disk]
  • Biological Unit Coordinates (1ot1.pdb1.gz) 125 Kb
  • LPC: Ligand-Protein Contacts for 1OT1
  • CSU: Contacts of Structural Units for 1OT1
  • Likely Quarternary Molecular Structure file(s) for 1OT1
  • Structure Factors (604 Kb)
  • Retrieve 1OT1 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1OT1 from S2C, [Save to disk]
  • Re-refined 1ot1 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1OT1 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1ot1] [1ot1_A]
  • SWISS-PROT database: [P43379]
  • Domains found in 1OT1: [Aamy] [Aamy_C] [CBM_2 ] by SMART

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