1OW1 Transcription date Mar 28, 2003
title Crystal Structure Of The Spoc Domain Of The Human Transcript Corepressor, Sharp.
authors J.W.Schwabe, M.Ariyoshi
compound source
Molecule: Smarthdac1 Associated Repressor Protein
Chain: A
Fragment: Spoc Domain
Synonym: Msx2 Interacting Nuclear Target (Mint) Homolog
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Rossetta Bl21(De3) Plyss
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet30a
symmetry Space Group: P 21 21 21
R_factor 0.214 R_Free 0.249
crystal
cell
length a length b length c angle alpha angle beta angle gamma
41.300 61.980 68.400 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.80 Å
note 1OW1 is a representative structure
Primary referenceA conserved structural motif reveals the essential transcriptional repression function of Spen proteins and their role in developmental signaling., Ariyoshi M, Schwabe JW, Genes Dev 2003 Aug 1;17(15):1909-20. PMID:12897056
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (31 Kb) [Save to disk]
  • Biological Unit Coordinates (1ow1.pdb1.gz) 27 Kb
  • CSU: Contacts of Structural Units for 1OW1
  • Likely Quarternary Molecular Structure file(s) for 1OW1
  • Structure Factors (271 Kb)
  • Retrieve 1OW1 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1OW1 from S2C, [Save to disk]
  • Re-refined 1ow1 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1OW1 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1OW1
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1OW1, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1ow1a_, region A [Jmol] [rasmolscript] [script source]
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1ow1_A] [1ow1]
  • SWISS-PROT database: [Q96T58]
  • Domain organization of [MINT_HUMAN] by SWISSPFAM
  • Other resources with information on 1OW1
  • Community annotation for 1OW1 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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