OCA Atlas for 1PF9

1PF9

date

authors

compound

source

symmetry

R_factor

R_Free

crystal
cell

length a	length b	length c	angle alpha	angle beta	angle gamma

method

X-Ray Diffraction

resolution

ligand

ADP, MG

enzyme

related structures

by homologous chain: 1AON, 1MNF, 1PCQ

Gene
Ontology

Chain	Function	Process	Component
M, D, N, G, J, I, A, B, H, L, F, K, C, E
Q, R, O, P, S, T, U

Primary reference

Role of the gamma-phosphate of ATP in triggering protein folding by GroEL-GroES: function, structure and energetics., Chaudhry C, Farr GW, Todd MJ, Rye HS, Brunger AT, Adams PD, Horwich AL, Sigler PB, EMBO J 2003 Oct 1;22(19):4877-87. PMID:14517228

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (1125 Kb) [Save to disk]

Biological Unit Coordinates (1pf9.pdb1.gz) 1110 Kb

LPC: Ligand-Protein Contacts for 1PF9

CSU: Contacts of Structural Units for 1PF9

Likely Quarternary Molecular Structure file(s) for 1PF9

Structure Factors (1971 Kb)

Retrieve 1PF9 in mmCIF format [Save to disk]

SEQRES to COORDINATES correlation for 1PF9 from S2C, [Save to disk]

Re-refined 1pf9 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 1PF9 in 3D

Proteopedia, because life has more than 2D.

On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.

On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1pf9] [1pf9_A] [1pf9_B] [1pf9_C] [1pf9_D] [1pf9_E] [1pf9_F] [1pf9_G] [1pf9_H] [1pf9_I] [1pf9_J] [1pf9_K] [1pf9_L] [1pf9_M] [1pf9_N] [1pf9_O] [1pf9_P] [1pf9_Q] [1pf9_R] [1pf9_S] [1pf9_T] [1pf9_U]

SWISS-PROT database: [P0A6F9] [P0A6F5]

Domain found in 1PF9: [Cpn10 ] by SMART

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