1PIW	Oxidoreductase	date	May 30, 2003
title	Apo And Holo Structures Of An Nadp(H)-Dependent Cinnamyl Alcohol Dehydrogenase From Saccharomyces Cerevisiae
authors	E.Valencia, C.Larroy, W.F.Ochoa, X.Pares, I.Fita, J.A.Biosca
compound		source
Molecule: Hypothetical Zinc-Type Alcohol Dehydrogenase- Like Protein In Pre5-Fet4 Intergenic Region; Chain: A, B Synonym: Ciannamyl Alcohol Dehydrogenase Engineered: Yes		Organism_scientific: Saccharomyces Cerevisiae Organism_common: Baker'S Yeast Organism_taxid: 4932 Gene: Ymr318c (Adh6) Expression_system: Saccharomyces Cerevisiae Expression_system_common: Baker'S Yeast Expression_system_taxid: 4932 Expression_system_strain: Bj2168 Expression_system_vector_type: Plasmid Expression_system_plasmid: Pyes2-Ymr318c
symmetry	Space Group: C 1 2 1	R_factor 0.218 R_Free 0.271
crystal cell	length a length b length c angle alpha angle beta angle gamma 234.980 100.350 52.490 90.00 92.18 90.00
method	X-Ray Diffraction	resolution	3.00 Å
ligand	NAP, ZN	enzyme
Gene Ontology	Chain Function Process Component A, B
Primary reference	Apo and Holo Structures of an NADP(H)-dependent Cinnamyl Alcohol Dehydrogenase from Saccharomyces cerevisiae., Valencia E, Larroy C, Ochoa WF, Pares X, Fita I, Biosca JA, J Mol Biol 2004 Aug 20;341(4):1049-62. PMID:15289102

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (121 Kb) [Save to disk] Biological Unit Coordinates (1piw.pdb1.gz) 115 Kb LPC: Ligand-Protein Contacts for 1PIW CSU: Contacts of Structural Units for 1PIW Likely Quarternary Molecular Structure file(s) for 1PIW Structure Factors (179 Kb) Retrieve 1PIW in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1PIW from S2C, [Save to disk] Re-refined 1piw structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 1PIW in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1PIW

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1PIW, from MSDmotif at EBI Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1piwa1, region A:1-152,A:321-360 [Jmol] [rasmolscript] [script source]     - Domain d1piwa2, region A:153-320 [Jmol] [rasmolscript] [script source]     - Domain d1piwb1, region B:1-152,B:321-360 [Jmol] [rasmolscript] [script source]     - Domain d1piwb2, region B:153-320 [Jmol] [rasmolscript] [script source]

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1piw_A] [1piw_B] [1piw] SWISS-PROT database: [Q04894] Domain organization of [ADH6_YEAST] by SWISSPFAM

Other resources with information on 1PIW

Community annotation for 1PIW at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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