1PKF date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand EPD, HEM enzyme
related structures by homologous chain: 1Q5D, 1Q5E
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceCrystal structures of epothilone D-bound, epothilone B-bound, and substrate-free forms of cytochrome P450epoK., Nagano S, Li H, Shimizu H, Nishida C, Ogura H, Ortiz de Montellano PR, Poulos TL, J Biol Chem 2003 Nov 7;278(45):44886-93. Epub 2003 Aug 21. PMID:12933799
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (74 Kb) [Save to disk]
  • Biological Unit Coordinates (1pkf.pdb1.gz) 69 Kb
  • LPC: Ligand-Protein Contacts for 1PKF
  • CSU: Contacts of Structural Units for 1PKF
  • Likely Quarternary Molecular Structure file(s) for 1PKF
  • Structure Factors (216 Kb)
  • Retrieve 1PKF in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1PKF from S2C, [Save to disk]
  • Re-refined 1pkf structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1PKF in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1pkf] [1pkf_A]
  • SWISS-PROT database: [Q9KIZ4]

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022,2024
    Bioinformatics Unit
    Weizmann Institute of Science