1PUZ Structural Genomics, Unknown Function date Jun 25, 2003
title Solution Nmr Structure Of Protein Nma1147 From Neisseria Men Northeast Structural Genomics Consortium Target Mr19
authors G.Liu, D.Xu, D.K.Sukumaran, Y.Chiang, T.Acton, G.T.Montelione, T.S Northeast Structural Genomics Consortium (Nesg)
compound source
Molecule: Conserved Hypothetical Protein
Chain: A
Engineered: Yes
 Organism_scientific: Neisseria Meningitidis
Organism_taxid: 122586
Strain: Mc58
Gene: Nma1147 Or Nmb0952
Expression_system: Escherichia Coli
Expression_system_taxid: 562
methodSolution NMR
Primary referenceNMR structure of the hypothetical protein NMA1147 from Neisseria meningitidis reveals a distinct 5-helix bundle., Liu G, Sukumaran DK, Xu D, Chiang Y, Acton T, Goldsmith-Fischman S, Honig B, Montelione GT, Szyperski T, Proteins 2004 May 15;55(3):756-8. PMID:15103637
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (463 Kb) [Save to disk]
  • Biological Unit Coordinates (1puz.pdb1.gz) 24 Kb
  • CSU: Contacts of Structural Units for 1PUZ
  • Original NMR restraints for 1PUZ from PDB
  • Experimental data, such as chemical shifts, at BioMagResBank (BMRB)
  • NMR Restraints Grid from BioMagResBank (BMRB)
  • Retrieve 1PUZ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1PUZ from S2C, [Save to disk]
    • View 1PUZ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1PUZ
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1PUZ, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1puza_, region A [Jmol] [rasmolscript] [script source]
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1puz_A] [1puz]
  • SWISS-PROT database: [Q7DDK1]
  • Domain organization of [Q7DDK1_NEIMB] by SWISSPFAM
    • Other resources with information on 1PUZ
  • Community annotation for 1PUZ at PDBWiki (http://pdbwiki.org)
  • NMR Ensemble (OLDERADO: core, domain and representative structure database)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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