1PYD date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand MG, TDP, TPP enzyme
related structures by homologous chain: 1PVD, 1QPB
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceCatalytic centers in the thiamin diphosphate dependent enzyme pyruvate decarboxylase at 2.4-A resolution., Dyda F, Furey W, Swaminathan S, Sax M, Farrenkopf B, Jordan F, Biochemistry 1993 Jun 22;32(24):6165-70. PMID:8512926
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (169 Kb) [Save to disk]
  • Biological Unit Coordinates (1pyd.pdb1.gz) 162 Kb
  • LPC: Ligand-Protein Contacts for 1PYD
  • CSU: Contacts of Structural Units for 1PYD
  • Likely Quarternary Molecular Structure file(s) for 1PYD
  • Retrieve 1PYD in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1PYD from S2C, [Save to disk]
  • View 1PYD in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1pyd] [1pyd_A] [1pyd_B]
  • SWISS-PROT database: [P06169]

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022,2024
    Bioinformatics Unit
    Weizmann Institute of Science