1PZQ Transferase date Jul 14, 2003
title Structure Of Fused Docking Domains From The Erythromycin Pol Synthase (Debs), A Model For The Interaction Between Debs 2 3: The A Domain
authors R.W.Broadhurst, D.Nietlispach, M.P.Wheatcroft, P.F.Leadlay, K.J.
compound source
Molecule: Erythronolide Synthase
Chain: A, B
Fragment: C-Terminal Fragment
Synonym: Orf 2, 6-Deoxyerythronolide B Synthase II, Debs 2
Ec: 2.3.1.94
Engineered: Yes
Mutation: Yes
Organism_scientific: Saccharopolyspora Erythraea
Organism_taxid: 1836
Gene: Erya
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl21-Codonplus
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pgex4t-3
methodSolution NMR
ligand
enzyme Transferase E.C.2.3.1.94 BRENDA
Primary referenceThe structure of docking domains in modular polyketide synthases., Broadhurst RW, Nietlispach D, Wheatcroft MP, Leadlay PF, Weissman KJ, Chem Biol 2003 Aug;10(8):723-31. PMID:12954331
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (237 Kb) [Save to disk]
  • Biological Unit Coordinates (1pzq.pdb1.gz) 29 Kb
  • CSU: Contacts of Structural Units for 1PZQ
  • Original NMR restraints for 1PZQ from PDB
  • Retrieve 1PZQ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1PZQ from S2C, [Save to disk]
  • View 1PZQ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1PZQ
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1PZQ, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1pzqa_, region A [Jmol] [rasmolscript] [script source]
        - Domain d1pzqb_, region B [Jmol] [rasmolscript] [script source]
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1pzq] [1pzq_A] [1pzq_B]
  • SWISS-PROT database: [Q03132]
  • Domain organization of [ERYA2_SACER] by SWISSPFAM
  • Other resources with information on 1PZQ
  • Community annotation for 1PZQ at PDBWiki (http://pdbwiki.org)
  • NMR Ensemble (OLDERADO: core, domain and representative structure database)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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