1Q4L	Transferase	date	Aug 04, 2003
title	Gsk-3 Beta Complexed With Inhibitor I-5
authors	J.A.Bertrand, S.Thieffine, A.Vulpetti, C.Cristiani, B.Valsasina, S.Knapp, H.M.Kalisz, M.Flocco
compound		source
Molecule: Glycogen Synthase Kinase-3 Beta Chain: A, B Synonym: Gsk-3 Beta Ec: 2.7.1.37 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Gsk3b Expression_system: Spodoptera Frugiperda Expression_system_common: Fall Armyworm Expression_system_taxid: 7108 Expression_system_cell_line: H5 Expression_system_vector: Baculovirus Expression_system_plasmid: Pvl-Gst-Gsk3beta
symmetry	Space Group: P 21 21 21	R_factor 0.212 R_Free 0.251
crystal cell	length a length b length c angle alpha angle beta angle gamma 84.167 86.664 178.650 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.77 Å
ligand	679 BindingDB	enzyme	Transferase E.C.2.7.1.37 BRENDA
related structures	by homologous chain: 1I09, 1UV5
Gene Ontology	Chain Function Process Component A, B protein serine/threonine kin... excitatory postsynaptic pote... positive regulation of mitoc... beta-catenin destruction com...
Primary reference	Structural characterization of the GSK-3beta active site using selective and non-selective ATP-mimetic inhibitors., Bertrand JA, Thieffine S, Vulpetti A, Cristiani C, Valsasina B, Knapp S, Kalisz HM, Flocco M, J Mol Biol 2003 Oct 17;333(2):393-407. PMID:14529625

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (118 Kb) [Save to disk] Biological Unit Coordinates (1q4l.pdb1.gz) 113 Kb LPC: Ligand-Protein Contacts for 1Q4L CSU: Contacts of Structural Units for 1Q4L Likely Quarternary Molecular Structure file(s) for 1Q4L Structure Factors (254 Kb) Retrieve 1Q4L in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1Q4L from S2C, [Save to disk] Re-refined 1q4l structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 1Q4L in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1Q4L

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1Q4L, from MSDmotif at EBI Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1q4la_, region A [Jmol] [rasmolscript] [script source]     - Domain d1q4lb_, region B [Jmol] [rasmolscript] [script source] Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH Summaries and structural analyses of PDB data files from PDBSum Identification of Protein Pockets & Cavities at CASTp

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1q4l_A] [1q4l_B] [1q4l] SWISS-PROT database: [P49841] Domain organization of [GSK3B_HUMAN] by SWISSPFAM Domain found in 1Q4L: [S_TKc ] by SMART

Other resources with information on 1Q4L

Community annotation for 1Q4L at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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