1QP6 De Novo Protein date Jun 01, 1999
title Solution Structure Of Alpha2d
authors R.B.Hill, W.F.Degrado
compound source
Molecule: Protein (Alpha2d)
Chain: A, B
Engineered: Yes
Synthetic: Yes
Other_details: The Peptide Was Chemically Synthesized. This Was Designed To Fold Into A Helix-Turn-Helix Peptide That D To Form A Four-Helix Bundle.
methodSolution NMR
note 1QP6 is a representative structure
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (327 Kb) [Save to disk]
  • Biological Unit Coordinates (1qp6.pdb1.gz) 20 Kb
  • CSU: Contacts of Structural Units for 1QP6
  • Original NMR restraints for 1QP6 from PDB
  • Retrieve 1QP6 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1QP6 from S2C, [Save to disk]
  • View 1QP6 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1QP6
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1QP6, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1qp6a_, region A [Jmol] [rasmolscript] [script source]
        - Domain d1qp6b_, region B [Jmol] [rasmolscript] [script source]
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1qp6] [1qp6_A] [1qp6_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 1QP6
  • Community annotation for 1QP6 at PDBWiki (http://pdbwiki.org)
  • NMR Ensemble (OLDERADO: core, domain and representative structure database)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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