1QTS	Membrane Protein	date	Jun 29, 1999
title	Crystal Structure Of The Ap-2 Clathrin Adaptor Alpha-Appenda
authors	L.M.Traub, M.A.Downs, J.L.Westrich, D.H.Fremont
compound		source
Molecule: Ap-2 Clathrin Adaptor Alpha Subunit (Alpha-Adapti Chain: A Fragment: C-Terminal Appendage (Ear) Residues 701-938 Engineered: Yes		Organism_scientific: Mus Musculus Organism_common: House Mouse Organism_taxid: 10090 Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Bl4 Expression_system_vector_type: Plasmid Expression_system_plasmid: Pgex-2t Other_details: Mus Musculus
symmetry	Space Group: P 1 21 1	R_factor 0.178 R_Free 0.209
crystal cell	length a length b length c angle alpha angle beta angle gamma 40.807 72.749 41.861 90.00 99.69 90.00
method	X-Ray Diffraction	resolution	1.40 Å
related structures	by homologous chain: 1KYF, 1QTP
Gene Ontology	Chain Function Process Component A
Primary reference	Crystal structure of the alpha appendage of AP-2 reveals a recruitment platform for clathrin-coat assembly., Traub LM, Downs MA, Westrich JL, Fremont DH, Proc Natl Acad Sci U S A 1999 Aug 3;96(16):8907-12. PMID:10430869

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (47 Kb) [Save to disk] Biological Unit Coordinates (1qts.pdb1.gz) 43 Kb CSU: Contacts of Structural Units for 1QTS Likely Quarternary Molecular Structure file(s) for 1QTS Retrieve 1QTS in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1QTS from S2C, [Save to disk]

View 1QTS in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1QTS

Ramachandran plot from PDBSum

Structure-derived information

Conformational Epitope Prediction for 1QTS from the CEP Server. Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1QTS, from MSDmotif at EBI Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1qtsa1, region A:692-824 [Jmol] [rasmolscript] [script source]     - Domain d1qtsa2, region A:825-938 [Jmol] [rasmolscript] [script source] Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH Summaries and structural analyses of PDB data files from PDBSum Identification of Protein Pockets & Cavities at CASTp

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1qts_A] [1qts] SWISS-PROT database: [P17427] Domain organization of [AP2A2_MOUSE] by SWISSPFAM Domain found in 1QTS: [Alpha_adaptinC2 ] by SMART

Other resources with information on 1QTS

Community annotation for 1QTS at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

Movements, Movies and Images

Images from IMB Jena Image Library of Biological Macromolecules.

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022 Bioinformatics Unit Weizmann Institute of Science

---