1QUQ Dna Binding Protein date Jul 02, 1999
title Complex Of Replication Protein A Subunits Rpa14 And Rpa32
authors A.Bochkarev, E.Bochkareva, L.Frappier, A.M.Edwards
compound source
Molecule: Protein (Replication Protein A 32 Kd Subunit)
Chain: A, C
Fragment: Central Domain, Residues 43-171
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Cellular_location: Nucleus
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_cell_line: Bl21(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet15b

Molecule: Protein (Replication Protein A 14 Kd Subunit)
Chain: B, D
Fragment: Rpa14
Engineered: Yes

Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Cellular_location: Nucleus
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_cell_line: Bl21(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet15b
symmetry Space Group: P 21 21 21
R_factor 0.212 R_Free 0.291
crystal
cell
length a length b length c angle alpha angle beta angle gamma
65.700 76.600 119.400 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.50 Å
related structures by homologous chain: 1L1O
Gene
Ontology
ChainFunctionProcessComponent
D, B


Primary referenceThe crystal structure of the complex of replication protein A subunits RPA32 and RPA14 reveals a mechanism for single-stranded DNA binding., Bochkarev A, Bochkareva E, Frappier L, Edwards AM, EMBO J 1999 Aug 16;18(16):4498-504. PMID:10449415
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (80 Kb) [Save to disk]
  • Biological Unit Coordinates (1quq.pdb1.gz) 76 Kb
  • Biological Unit Coordinates (1quq.pdb2.gz) 39 Kb
  • Biological Unit Coordinates (1quq.pdb3.gz) 39 Kb
  • CSU: Contacts of Structural Units for 1QUQ
  • Likely Quarternary Molecular Structure file(s) for 1QUQ
  • Structure Factors (189 Kb)
  • Retrieve 1QUQ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1QUQ from S2C, [Save to disk]
  • Re-refined 1quq structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1QUQ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1QUQ
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1QUQ, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1quqa_, region A [Jmol] [rasmolscript] [script source]
        - Domain d1quqb_, region B [Jmol] [rasmolscript] [script source]
        - Domain d1quqc_, region C [Jmol] [rasmolscript] [script source]
        - Domain d1quqd_, region D [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1quq_D] [1quq_C] [1quq_A] [1quq_B] [1quq]
  • SWISS-PROT database: [P15927] [P35244]
  • Domain organization of [RFA2_HUMAN] [RFA3_HUMAN] by SWISSPFAM
  • Other resources with information on 1QUQ
  • Community annotation for 1QUQ at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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