OCA Atlas for 1R1Z

1R1Z

date

authors

compound

source

symmetry

R_factor

R_Free

crystal
cell

length a	length b	length c	angle alpha	angle beta	angle gamma

method

X-Ray Diffraction

resolution

ligand

enzyme

related structures

by homologous chain: 1GV9

Gene
Ontology

Chain	Function	Process	Component
A, D, C, B

Primary reference

The crystal structure of the carbohydrate-recognition domain of the glycoprotein sorting receptor p58/ERGIC-53 reveals an unpredicted metal-binding site and conformational changes associated with calcium ion binding., Velloso LM, Svensson K, Pettersson RF, Lindqvist Y, J Mol Biol 2003 Dec 12;334(5):845-51. PMID:14643651

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (160 Kb) [Save to disk]

Biological Unit Coordinates (1r1z.pdb1.gz) 42 Kb

Biological Unit Coordinates (1r1z.pdb2.gz) 41 Kb

Biological Unit Coordinates (1r1z.pdb3.gz) 41 Kb

Biological Unit Coordinates (1r1z.pdb4.gz) 40 Kb

LPC: Ligand-Protein Contacts for 1R1Z

CSU: Contacts of Structural Units for 1R1Z

Likely Quarternary Molecular Structure file(s) for 1R1Z

Structure Factors (616 Kb)

Retrieve 1R1Z in mmCIF format [Save to disk]

SEQRES to COORDINATES correlation for 1R1Z from S2C, [Save to disk]

Re-refined 1r1z structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 1R1Z in 3D

Proteopedia, because life has more than 2D.

On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.

On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1r1z] [1r1z_A] [1r1z_B] [1r1z_C] [1r1z_D]

SWISS-PROT database: [Q62902]

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