1R8G date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand MSE enzyme
note 1R8G is a representative structure
related structures by homologous chain: 1TT4
Gene
Ontology
ChainFunctionProcessComponent
B, A


Primary referenceYbdK is a carboxylate-amine ligase with a gamma-glutamyl:Cysteine ligase activity: crystal structure and enzymatic assays., Lehmann C, Doseeva V, Pullalarevu S, Krajewski W, Howard A, Herzberg O, Proteins 2004 Aug 1;56(2):376-83. PMID:15211520
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (129 Kb) [Save to disk]
  • Biological Unit Coordinates (1r8g.pdb1.gz) 123 Kb
  • LPC: Ligand-Protein Contacts for 1R8G
  • CSU: Contacts of Structural Units for 1R8G
  • Likely Quarternary Molecular Structure file(s) for 1R8G
  • Structure Factors (888 Kb)
  • Retrieve 1R8G in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1R8G from S2C, [Save to disk]
  • Re-refined 1r8g structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1R8G in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1r8g] [1r8g_A] [1r8g_B]
  • SWISS-PROT database: [P77213]

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