1RE6 Contractile Protein date Nov 06, 2003
title Localisation Of Dynein Light Chains 1 And 2 And Their Pro-Ap Ligands
authors C.L.Day, H.Puthalakath, G.Skea, A.Strasser, I.Barsukov, L.Y.Lian, D.C.Huang, M.G.Hinds
compound source
Molecule: Dynein Light Chain 2
Chain: A, B
Engineered: Yes
 Organism_scientific: Mus Musculus
Organism_common: House Mouse
Organism_taxid: 10090
Gene: Dlc2
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_strain: Bl21 (De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pgex6p-3
methodSolution NMR
related structures by homologous chain: 1F96, 1RHW
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceLocalization of dynein light chains 1 and 2 and their pro-apoptotic ligands., Day CL, Puthalakath H, Skea G, Strasser A, Barsukov I, Lian LY, Huang DC, Hinds MG, Biochem J 2004 Feb 1;377(Pt 3):597-605. PMID:14561217
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (1004 Kb) [Save to disk]
  • Biological Unit Coordinates (1re6.pdb1.gz) 50 Kb
  • CSU: Contacts of Structural Units for 1RE6
  • Retrieve 1RE6 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1RE6 from S2C, [Save to disk]
    • View 1RE6 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1RE6
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1RE6, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1re6a_, region A [Jmol] [rasmolscript] [script source]
        - Domain d1re6b_, region B [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1re6_A] [1re6_B] [1re6]
  • SWISS-PROT database: [Q9D0M5]
  • Domain organization of [DYL2_MOUSE] by SWISSPFAM
  • Domain found in 1RE6: [Dynein_light ] by SMART
    • Other resources with information on 1RE6
  • Community annotation for 1RE6 at PDBWiki (http://pdbwiki.org)
  • NMR Ensemble (OLDERADO: core, domain and representative structure database)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

    • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science