1RFO Viral Protein date Nov 10, 2003
title Trimeric Foldon Of The T4 Phagehead Fibritin
authors S.Guthe, L.Kapinos, A.Moglich, S.Meier, T.Kiefhaber, S.Grzesiek
compound source
Molecule: Whisker Antigen Control Protein
Chain: A, B, C
Fragment: Trimerization Domain (Residues 457-483)
Engineered: Yes
 Organism_scientific: Enterobacteria Phage T4
Organism_taxid: 10665
Gene: Wac
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet32a
methodSolution NMR
Primary referenceVery fast folding and association of a trimerization domain from bacteriophage t4 fibritin., Guthe S, Kapinos L, Moglich A, Meier S, Grzesiek S, Kiefhaber T, J Mol Biol 2004 Apr 2;337(4):905-15. PMID:15033360
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (219 Kb) [Save to disk]
  • Biological Unit Coordinates (1rfo.pdb1.gz) 22 Kb
  • CSU: Contacts of Structural Units for 1RFO
  • Original NMR restraints for 1RFO from PDB
  • Retrieve 1RFO in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1RFO from S2C, [Save to disk]
    • View 1RFO in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1RFO
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1RFO, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1rfoa_, region A [Jmol] [rasmolscript] [script source]
        - Domain d1rfob_, region B [Jmol] [rasmolscript] [script source]
        - Domain d1rfoc_, region C [Jmol] [rasmolscript] [script source]
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1rfo] [1rfo_B] [1rfo_C] [1rfo_A]
  • SWISS-PROT database: [P10104]
  • Domain organization of [WAC_BPT4] by SWISSPFAM
    • Other resources with information on 1RFO
  • Community annotation for 1RFO at PDBWiki (http://pdbwiki.org)
  • NMR Ensemble (OLDERADO: core, domain and representative structure database)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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