OCA Atlas for 1RJ7

1RJ7

date

authors

compound

source

symmetry

R_factor

R_Free

crystal
cell

length a	length b	length c	angle alpha	angle beta	angle gamma

method

X-Ray Diffraction

resolution

related structures

by homologous chain: 1RJ8

Gene
Ontology

Chain	Function	Process	Component
H, L, J, K, E, G, B, D, A, I, M, F

Primary reference

The crystal structures of EDA-A1 and EDA-A2: splice variants with distinct receptor specificity., Hymowitz SG, Compaan DM, Yan M, Wallweber HJ, Dixit VM, Starovasnik MA, de Vos AM, Structure. 2003 Dec;11(12):1513-20. PMID:14656435

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (274 Kb) [Save to disk]

Biological Unit Coordinates (1rj7.pdb1.gz) 69 Kb

Biological Unit Coordinates (1rj7.pdb2.gz) 71 Kb

Biological Unit Coordinates (1rj7.pdb3.gz) 69 Kb

Biological Unit Coordinates (1rj7.pdb4.gz) 70 Kb

CSU: Contacts of Structural Units for 1RJ7

Likely Quarternary Molecular Structure file(s) for 1RJ7

Structure Factors (527 Kb)

Retrieve 1RJ7 in mmCIF format [Save to disk]

SEQRES to COORDINATES correlation for 1RJ7 from S2C, [Save to disk]

Re-refined 1rj7 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 1RJ7 in 3D

Proteopedia, because life has more than 2D.

On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.

On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1rj7] [1rj7_A] [1rj7_B] [1rj7_D] [1rj7_E] [1rj7_F] [1rj7_G] [1rj7_H] [1rj7_I] [1rj7_J] [1rj7_K] [1rj7_L] [1rj7_M]

SWISS-PROT database: [Q92838]

Domain found in 1RJ7: [TNF ] by SMART

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