1RNA Rna date Feb 01, 1990
title Crystallographic Structure Of An Rna Helix: [U(U-A)6a]2
authors A.C.Dock-Bregeon, B.Chevrier, A.Podjarny, J.Johnson, J.S.De Bear G.R.Gough, P.T.Gilham, D.Moras
compound source
Molecule: Rna (5'-R(Upupapupapupapupapupapupap
Chain: A, B
Engineered: Yes
 Synthetic: Yes
symmetry Space Group: P 21 21 21
R_factor
R_Free NULL
crystal
cell
length a length b length c angle alpha angle beta angle gamma
34.110 44.610 49.110 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.25 Å
Primary referenceCrystallographic structure of an RNA helix: [U(UA)6A]2., Dock-Bregeon AC, Chevrier B, Podjarny A, Johnson J, de Bear JS, Gough GR, Gilham PT, Moras D, J Mol Biol 1989 Oct 5;209(3):459-74. PMID:2479753
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (17 Kb) [Save to disk]
  • Biological Unit Coordinates (1rna.pdb1.gz) 13 Kb
  • CSU: Contacts of Structural Units for 1RNA
  • Likely Quarternary Molecular Structure file(s) for 1RNA
  • Retrieve 1RNA in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1RNA from S2C, [Save to disk]
    • View 1RNA in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1RNA
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1RNA, from MSDmotif at EBI
  • Structure summary from SCOR (Structural Classification of RNA)
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1rna_A] [1rna_B] [1rna]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 1RNA
  • Community annotation for 1RNA at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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