1RNB Endonuclease date Mar 19, 1991
title Crystal Structure Of A Barnase-D(Gpc) Complex At 1.9 Angst Resolution
authors J.Janin, S.Baudet
compound source
Molecule: Dna (5'-D(Gpc)-3')
Chain: C
Ec: 3.1.27.-
Engineered: Yes
Synthetic: Yes

Molecule: Barnase
Chain: A
Engineered: Yes

Organism_scientific: Bacillus Amyloliquefaciens
Organism_taxid: 1390
symmetry Space Group: P 31 2 1
R_factor 0.214 R_Free NULL
crystal
cell
length a length b length c angle alpha angle beta angle gamma
57.970 57.970 85.370 90.00 90.00 120.00
method X-Ray Diffractionresolution 1.90 Å
ligand SO4 enzyme Hydrolase E.C.3.1.27 BRENDA
related structures by homologous chain: 1BRK, 1X1Y
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceCrystal structure of a barnase-d(GpC) complex at 1.9 A resolution., Baudet S, Janin J, J Mol Biol 1991 May 5;219(1):123-32. PMID:2023257
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (25 Kb) [Save to disk]
  • Biological Unit Coordinates (1rnb.pdb1.gz) 21 Kb
  • LPC: Ligand-Protein Contacts for 1RNB
  • CSU: Contacts of Structural Units for 1RNB
  • Likely Quarternary Molecular Structure file(s) for 1RNB
  • Retrieve 1RNB in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1RNB from S2C, [Save to disk]
  • View 1RNB in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1RNB
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1RNB, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1rnba_, region A [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1rnb_C] [1rnb_A] [1rnb]
  • SWISS-PROT database: [P00648]
  • Domain organization of [RNBR_BACAM] by SWISSPFAM
  • Other resources with information on 1RNB
  • Community annotation for 1RNB at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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