1RY1 date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand CCC enzyme
Gene
Ontology
ChainFunctionProcessComponent
B


C


D


U


W


Primary referenceStructure of the signal recognition particle interacting with the elongation-arrested ribosome., Halic M, Becker T, Pool MR, Spahn CM, Grassucci RA, Frank J, Beckmann R, Nature 2004 Feb 26;427(6977):808-14. PMID:14985753
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (231 Kb) [Save to disk]
  • Biological Unit Coordinates (1ry1.pdb1.gz) 225 Kb
  • LPC: Ligand-Protein Contacts for 1RY1
  • CSU: Contacts of Structural Units for 1RY1
  • Likely Quarternary Molecular Structure file(s) for 1RY1
  • Retrieve 1RY1 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1RY1 from S2C, [Save to disk]
    • View 1RY1 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1ry1] [1ry1_A] [1ry1_B] [1ry1_C] [1ry1_D] [1ry1_E] [1ry1_M] [1ry1_N] [1ry1_O] [1ry1_P] [1ry1_Q] [1ry1_R] [1ry1_S] [1ry1_U] [1ry1_W]
  • SWISS-PROT database: [O62798] [P49458] [P37108] [P09132] [P14576] [O07347]
  • Belongs to the general secretory pathway (sec) family according to TCDB.
  • Domains found in 1RY1: [AAA] [SRP54] [SRP54_N ] by SMART

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