1RY9 date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand CL enzyme
note 1RY9 is a representative structure
Gene
Ontology
ChainFunctionProcessComponent
C, D, A, B


Primary referenceStructure of Spa15, a type III secretion chaperone from Shigella flexneri with broad specificity., van Eerde A, Hamiaux C, Perez J, Parsot C, Dijkstra BW, EMBO Rep 2004 May;5(5):477-83. Epub 2004 Apr 16. PMID:15088068
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (95 Kb) [Save to disk]
  • Biological Unit Coordinates (1ry9.pdb1.gz) 45 Kb
  • Biological Unit Coordinates (1ry9.pdb2.gz) 46 Kb
  • LPC: Ligand-Protein Contacts for 1RY9
  • CSU: Contacts of Structural Units for 1RY9
  • Likely Quarternary Molecular Structure file(s) for 1RY9
  • Structure Factors (332 Kb)
  • Retrieve 1RY9 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1RY9 from S2C, [Save to disk]
  • Re-refined 1ry9 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1RY9 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1ry9] [1ry9_A] [1ry9_B] [1ry9_C] [1ry9_D]
  • SWISS-PROT database: [P35530]
  • Belongs to the type iii (virulence-related) secretory pathway (iiisp) family according to TCDB.

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