1RYA date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand CL, GDP, MG, TRS enzyme
Gene
Ontology
ChainFunctionProcessComponent
B, A


Primary referenceStructure and mechanism of GDP-mannose glycosyl hydrolase, a Nudix enzyme that cleaves at carbon instead of phosphorus., Gabelli SB, Bianchet MA, Azurmendi HF, Xia Z, Sarawat V, Mildvan AS, Amzel LM, Structure. 2004 Jun;12(6):927-35. PMID:15274914
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (73 Kb) [Save to disk]
  • Biological Unit Coordinates (1rya.pdb1.gz) 67 Kb
  • LPC: Ligand-Protein Contacts for 1RYA
  • CSU: Contacts of Structural Units for 1RYA
  • Likely Quarternary Molecular Structure file(s) for 1RYA
  • Retrieve 1RYA in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1RYA from S2C, [Save to disk]
  • View 1RYA in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1rya] [1rya_A] [1rya_B]
  • SWISS-PROT database: [P32056]

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