1RYY date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
related structures by homologous chain: 1NX9
Gene
Ontology
ChainFunctionProcessComponent
A, B, E, H, F, D, C, G
  • dipeptidyl-peptidase activit...


  • Primary referenceAcetobacter turbidans alpha-amino acid ester hydrolase: how a single mutation improves an antibiotic-producing enzyme., Barends TR, Polderman-Tijmes JJ, Jekel PA, Williams C, Wybenga G, Janssen DB, Dijkstra BW, J Biol Chem. 2006 Mar 3;281(9):5804-10. Epub 2005 Dec 23. PMID:16377627
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (663 Kb) [Save to disk]
  • Biological Unit Coordinates (1ryy.pdb1.gz) 334 Kb
  • Biological Unit Coordinates (1ryy.pdb2.gz) 331 Kb
  • CSU: Contacts of Structural Units for 1RYY
  • Likely Quarternary Molecular Structure file(s) for 1RYY
  • Structure Factors (1877 Kb)
  • Retrieve 1RYY in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1RYY from S2C, [Save to disk]
  • Re-refined 1ryy structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1RYY in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1ryy] [1ryy_A] [1ryy_B] [1ryy_C] [1ryy_D] [1ryy_E] [1ryy_F] [1ryy_G] [1ryy_H]
  • SWISS-PROT database: [Q8VRK8]
  • Domain found in 1RYY: [PepX_C ] by SMART

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