1SDA	Oxidoreductase(Copper)	date	Jan 13, 1993
title	Crystal Structure Of Peroxynitrite-Modified Bovine Cu,Zn Sup Dismutase
authors	C.D.Smith, M.Carson, M.Van Der Woerd, J.Chen, H.Ischiropoulos, J.
compound		source
Molecule: Copper,Zinc Superoxide Dismutase Chain: O, Y, B, G Ec: 1.15.1.1 Engineered: Yes		Organism_scientific: Bos Taurus Organism_common: Cattle Organism_taxid: 9913
symmetry	Space Group: C 1 2 1	R_factor 0.187 R_Free NULL
crystal cell	length a length b length c angle alpha angle beta angle gamma 93.650 90.330 71.650 90.00 95.10 90.00
method	X-Ray Diffraction	resolution	2.50 Å
ligand	ACE, CU, NIY, ZN	enzyme	Oxidoreductase E.C.1.15.1.1 BRENDA
related structures	by homologous chain: 1SOS, 1SPD
Gene Ontology	Chain Function Process Component O, G, Y, B
Primary reference	Crystal structure of peroxynitrite-modified bovine Cu,Zn superoxide dismutase., Smith CD, Carson M, van der Woerd M, Chen J, Ischiropoulos H, Beckman JS, Arch Biochem Biophys 1992 Dec;299(2):350-5. PMID:1444476

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (95 Kb) [Save to disk] Biological Unit Coordinates (1sda.pdb1.gz) 46 Kb Biological Unit Coordinates (1sda.pdb2.gz) 46 Kb LPC: Ligand-Protein Contacts for 1SDA CSU: Contacts of Structural Units for 1SDA Likely Quarternary Molecular Structure file(s) for 1SDA Retrieve 1SDA in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1SDA from S2C, [Save to disk]

View 1SDA in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1SDA

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1SDA, from MSDmotif at EBI Genome occurence of 1SDA's fold from GeneCensus Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1sdab_, region B [Jmol] [rasmolscript] [script source]     - Domain d1sdag_, region G [Jmol] [rasmolscript] [script source]     - Domain d1sdao_, region O [Jmol] [rasmolscript] [script source]     - Domain d1sday_, region Y [Jmol] [rasmolscript] [script source] Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH Summaries and structural analyses of PDB data files from PDBSum Identification of Protein Pockets & Cavities at CASTp

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1sda_O] [1sda_B] [1sda] [1sda_Y] [1sda_G] SWISS-PROT database: [P00442] Domain organization of [SODC_BOVIN] by SWISSPFAM

Other resources with information on 1SDA

Community annotation for 1SDA at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

Movements, Movies and Images

Images from IMB Jena Image Library of Biological Macromolecules.

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022 Bioinformatics Unit Weizmann Institute of Science

---