1T4Z Transferase date Apr 30, 2004
title Solution Structure Of The N-Terminal Domain Of Synechococcus Sasa (25-Structures Ensemble)
authors I.Vakonakis, D.A.Klewer, A.C.Liwang
compound source
Molecule: Adaptive-Response Sensory-Kinase Sasa
Chain: A
Fragment: N-Terminal Domain
Ec: 2.7.-.-
Engineered: Yes
 Organism_scientific: Synechococcus Elongatus
Organism_taxid: 1140
Strain: Pcc 7942
Gene: Sasa, Sars
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet32a+
methodSolution NMR
ligand
enzyme Transferase E.C.2.7 BRENDA
related structures by homologous chain: 1T4Y
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceStructure of the N-terminal domain of the circadian clock-associated histidine kinase SasA., Vakonakis I, Klewer DA, Williams SB, Golden SS, LiWang AC, J Mol Biol 2004 Sep 3;342(1):9-17. PMID:15313603
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (694 Kb) [Save to disk]
  • Biological Unit Coordinates (1t4z.pdb1.gz) 29 Kb
  • CSU: Contacts of Structural Units for 1T4Z
  • Original NMR restraints for 1T4Z from PDB
  • Experimental data, such as chemical shifts, at BioMagResBank (BMRB)
  • NMR Restraints Grid from BioMagResBank (BMRB)
  • Retrieve 1T4Z in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1T4Z from S2C, [Save to disk]
    • View 1T4Z in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1T4Z
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1T4Z, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1t4za_, region A [Jmol] [rasmolscript] [script source]
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1t4z_A] [1t4z]
  • SWISS-PROT database: [Q06904]
  • Domain organization of [SASA_SYNE7] by SWISSPFAM
  • Domain found in 1T4Z: [KaiB ] by SMART
    • Other resources with information on 1T4Z
  • Community annotation for 1T4Z at PDBWiki (http://pdbwiki.org)
  • NMR Ensemble (OLDERADO: core, domain and representative structure database)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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