1T6F Cell Cycle date May 06, 2004
title Crystal Structure Of The Coiled-Coil Dimerization Motif Of G
authors M.Thepaut, D.Maiorano, J.F.Guichou, M.T.Auge, C.Dumas, M.Mechal A.Padilla
compound source
Molecule: Geminin
Chain: A, B
Fragment: Coiled-Coil Domain
Engineered: Yes
Mutation: Yes
 Synthetic: Yes
Other_details: The Peptide Was Synthesized Using Fmoc Solid Peptide Synthesis. The Sequence Of The Peptide Is Naturally Homo Sapiens (Human).
symmetry Space Group: P 21 21 21
R_factor 0.179 R_Free 0.221
crystal
cell
length a length b length c angle alpha angle beta angle gamma
25.120 43.440 67.500 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.47 Å
note 1T6F is a representative structure
related structures by homologous chain: 1UII
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceCrystal Structure of the Coiled-coil Dimerization Motif of Geminin: Structural and Functional Insights on DNA Replication Regulation., Thepaut M, Maiorano D, Guichou JF, Auge MT, Dumas C, Mechali M, Padilla A, J Mol Biol 2004 Sep 3;342(1):275-87. PMID:15313623
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (30 Kb) [Save to disk]
  • Biological Unit Coordinates (1t6f.pdb1.gz) 26 Kb
  • CSU: Contacts of Structural Units for 1T6F
  • Likely Quarternary Molecular Structure file(s) for 1T6F
  • Structure Factors (86 Kb)
  • Retrieve 1T6F in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1T6F from S2C, [Save to disk]
  • Re-refined 1t6f structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 1T6F in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1T6F
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Conformational Epitope Prediction for 1T6F 1T6FA 1T6FB from the CEP Server.
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1T6F, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1t6fa_, region A [Jmol] [rasmolscript] [script source]
        - Domain d1t6fb_, region B [Jmol] [rasmolscript] [script source]
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1t6f] [1t6f_B] [1t6f_A]
  • SWISS-PROT database: [O75496]
  • Domain organization of [GEMI_HUMAN] by SWISSPFAM
    • Other resources with information on 1T6F
  • Community annotation for 1T6F at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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