1TPH Triosephosphate Isomerase date Dec 22, 1993
title 1.8 Angstroms Crystal Structure Of Wild Type Chicken Triosep Isomerase-Phosphoglycolohydroxamate Complex
authors Z.Zhang, S.Sugio, E.A.Komives, K.D.Liu, J.R.Knowles, G.A.Petsko, D
compound source
Molecule: Triosephosphate Isomerase
Chain: 1, 2
Ec: 5.3.1.1
Engineered: Yes
Organism_scientific: Gallus Gallus
Organism_common: Chicken
Organism_taxid: 9031
symmetry Space Group: P 21 21 21
R_factor
R_Free NULL
crystal
cell
length a length b length c angle alpha angle beta angle gamma
136.400 74.000 57.200 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.80 Å
ligand PGH BindingDB enzyme Isomerase E.C.5.3.1.1 BRENDA
related structures by homologous chain: 1SW0, 1TPU
Gene
Ontology
ChainFunctionProcessComponent
1, 2


Primary referenceCrystal structure of recombinant chicken triosephosphate isomerase-phosphoglycolohydroxamate complex at 1.8-A resolution., Zhang Z, Sugio S, Komives EA, Liu KD, Knowles JR, Petsko GA, Ringe D, Biochemistry 1994 Mar 15;33(10):2830-7. PMID:8130195
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (82 Kb) [Save to disk]
  • Biological Unit Coordinates (1tph.pdb1.gz) 77 Kb
  • LPC: Ligand-Protein Contacts for 1TPH
  • CSU: Contacts of Structural Units for 1TPH
  • Likely Quarternary Molecular Structure file(s) for 1TPH
  • Retrieve 1TPH in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1TPH from S2C, [Save to disk]
  • View 1TPH in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1TPH
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1TPH, from MSDmotif at EBI
  • Genome occurence of 1TPH's fold from GeneCensus
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1tph1_, region 1 [Jmol] [rasmolscript] [script source]
        - Domain d1tph2_, region 2 [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1tph] [1tph_2] [1tph_1]
  • SWISS-PROT database: [P00940]
  • Domain organization of [TPIS_CHICK] by SWISSPFAM
  • Other resources with information on 1TPH
  • Community annotation for 1TPH at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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