1TW4 Lipid Binding Protein date Jun 30, 2004
title Crystal Structure Of Chicken Liver Basic Fatty Acid Binding (Bile Acid Binding Protein) Complexed With Cholic Acid
authors D.Nichesola, M.Perduca, S.Capaldi, M.E.Carrizo, P.G.Righetti, H.L
compound source
Molecule: Fatty Acid-Binding Protein
Chain: A, B
Synonym: L-Fabp, Liver Basic Fabp, Lb- Fabp, Bile Acid-Bind Protein
 Organism_scientific: Gallus Gallus
Organism_common: Chicken
Organism_taxid: 9031
Tissue: Liver
symmetry Space Group: P 21 21 21
R_factor 0.216 R_Free 0.257
crystal
cell
length a length b length c angle alpha angle beta angle gamma
60.310 63.410 77.230 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.00 Å
ligand CHD enzyme
related structures by homologous chain: 1TVQ
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceCrystal structure of chicken liver basic Fatty Acid-binding protein complexed with cholic acid., Nichesola D, Perduca M, Capaldi S, Carrizo ME, Righetti PG, Monaco HL, Biochemistry 2004 Nov 9;43(44):14072-9. PMID:15518556
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (51 Kb) [Save to disk]
  • Biological Unit Coordinates (1tw4.pdb1.gz) 25 Kb
  • Biological Unit Coordinates (1tw4.pdb2.gz) 24 Kb
  • LPC: Ligand-Protein Contacts for 1TW4
  • CSU: Contacts of Structural Units for 1TW4
  • Likely Quarternary Molecular Structure file(s) for 1TW4
  • Structure Factors (155 Kb)
  • Retrieve 1TW4 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1TW4 from S2C, [Save to disk]
  • Re-refined 1tw4 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 1TW4 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1TW4
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1TW4, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1tw4a_, region A [Jmol] [rasmolscript] [script source]
        - Domain d1tw4b_, region B [Jmol] [rasmolscript] [script source]
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1tw4_B] [1tw4] [1tw4_A]
  • SWISS-PROT database: [P80226]
  • Domain organization of [FABPL_CHICK] by SWISSPFAM
    • Other resources with information on 1TW4
  • Community annotation for 1TW4 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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