1U5W Unknown Function date Jul 28, 2004
title Crystal Structure Of Hypothetical Protein Yjjx From Escheric
authors J.Zheng, V.K.Singh, Z.Jia, Montreal-Kingston Bacterial Structur Genomics Initiative (Bsgi)
compound source
Molecule: Hypothetical Upf0244 Protein Yjjx
Chain: A, B, C, D, E, F, G, H
Engineered: Yes
 Organism_scientific: Escherichia Coli
Organism_taxid: 562
Gene: Yjjx
Expression_system: Escherichia Coli Bl21
Expression_system_taxid: 511693
Expression_system_strain: Bl21
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet21b
symmetry Space Group: P 1 21 1
R_factor 0.200 R_Free 0.255
crystal
cell
length a length b length c angle alpha angle beta angle gamma
70.996 129.336 85.378 90.00 90.23 90.00
method X-Ray Diffractionresolution 2.30 Å
ligand SO4 enzyme
Gene
Ontology
ChainFunctionProcessComponent
F, A, E, B, H, C, D, G


Primary referenceIdentification of an ITPase/XTPase in Escherichia coli by structural and biochemical analysis., Zheng J, Singh VK, Jia Z, Structure (Camb) 2005 Oct;13(10):1511-20. PMID:16216582
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (227 Kb) [Save to disk]
  • Biological Unit Coordinates (1u5w.pdb1.gz) 58 Kb
  • Biological Unit Coordinates (1u5w.pdb2.gz) 60 Kb
  • Biological Unit Coordinates (1u5w.pdb3.gz) 59 Kb
  • Biological Unit Coordinates (1u5w.pdb4.gz) 57 Kb
  • LPC: Ligand-Protein Contacts for 1U5W
  • CSU: Contacts of Structural Units for 1U5W
  • Likely Quarternary Molecular Structure file(s) for 1U5W
  • Structure Factors (523 Kb)
  • Retrieve 1U5W in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1U5W from S2C, [Save to disk]
  • Re-refined 1u5w structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 1U5W in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1U5W
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1U5W, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1u5w_H] [1u5w_G] [1u5w_C] [1u5w_E] [1u5w_D] [1u5w_A] [1u5w_B] [1u5w_F] [1u5w]
  • SWISS-PROT database: [P39411]
  • Domain organization of [YJJX_ECOLI] by SWISSPFAM
    • Other resources with information on 1U5W
  • Community annotation for 1U5W at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

    • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science