1UA2	Cell Cycle, Transferase	date	Aug 11, 2004
title	Crystal Structure Of Human Cdk7
authors	G.Lolli, E.D.Lowe, N.R.Brown, L.N.Johnson
compound		source
Molecule: Cell Division Protein Kinase 7 Chain: A, B, C, D Synonym: Cdk-Activating Kinase; Cak; Tfiih Basal Transcript Complex Kinase Subunit; 39 Kda Protein Kinase; P39 Mo15; St Serinethreonine Kinase Stk1; Serinethreonine Protein Kina Ec: 2.7.1.37 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Cdk7 Expression_system: Spodoptera Frugiperda Expression_system_common: Fall Armyworm Expression_system_taxid: 7108 Expression_system_cell_line: Sf21 Expression_system_vector_type: Baculovirus Expression_system_plasmid: Pvl1392 Other_details: Sf21 Cells In Culture
symmetry	Space Group: P 1 21 1	R_factor 0.213 R_Free 0.288
crystal cell	length a length b length c angle alpha angle beta angle gamma 65.501 191.635 75.794 90.00 94.40 90.00
method	X-Ray Diffraction	resolution	3.02 Å
ligand	ATP, TPO	enzyme	Transferase E.C.2.7.1.37 BRENDA
Gene Ontology	Chain Function Process Component A, D, C, B
Primary reference	The crystal structure of human CDK7 and its protein recognition properties., Lolli G, Lowe ED, Brown NR, Johnson LN, Structure (Camb) 2004 Nov;12(11):2067-79. PMID:15530371

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (193 Kb) [Save to disk] Biological Unit Coordinates (1ua2.pdb1.gz) 48 Kb Biological Unit Coordinates (1ua2.pdb2.gz) 48 Kb Biological Unit Coordinates (1ua2.pdb3.gz) 48 Kb Biological Unit Coordinates (1ua2.pdb4.gz) 48 Kb LPC: Ligand-Protein Contacts for 1UA2 CSU: Contacts of Structural Units for 1UA2 Likely Quarternary Molecular Structure file(s) for 1UA2 Structure Factors (299 Kb) Retrieve 1UA2 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1UA2 from S2C, [Save to disk] Re-refined 1ua2 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 1UA2 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1UA2

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1UA2, from MSDmotif at EBI Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1ua2a_, region A [Jmol] [rasmolscript] [script source]     - Domain d1f1ua2, region A:148-323 [Jmol] [rasmolscript] [script source]     - Domain d1u1ua2, region A:396-760 [Jmol] [rasmolscript] [script source]     - Domain d1s1ua2, region A:4-429 [Jmol] [rasmolscript] [script source]     - Domain d1ua2b_, region B [Jmol] [rasmolscript] [script source]     - Domain d1ua2c_, region C [Jmol] [rasmolscript] [script source]     - Domain d1ua2d_, region D [Jmol] [rasmolscript] [script source]

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1ua2] [1ua2_A] [1ua2_C] [1ua2_B] [1ua2_D] SWISS-PROT database: [P50613] Domain organization of [CDK7_HUMAN] by SWISSPFAM Domain found in 1UA2: [S_TKc ] by SMART

Other resources with information on 1UA2

Community annotation for 1UA2 at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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