1UBD date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand ZN enzyme
Primary referenceCocrystal structure of YY1 bound to the adeno-associated virus P5 initiator., Houbaviy HB, Usheva A, Shenk T, Burley SK, Proc Natl Acad Sci U S A 1996 Nov 26;93(24):13577-82. PMID:8942976
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (42 Kb) [Save to disk]
  • Biological Unit Coordinates (1ubd.pdb1.gz) 37 Kb
  • LPC: Ligand-Protein Contacts for 1UBD
  • CSU: Contacts of Structural Units for 1UBD
  • Likely Quarternary Molecular Structure file(s) for 1UBD
  • Retrieve 1UBD in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1UBD from S2C, [Save to disk]
  • View 1UBD in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1ubd] [1ubd_A] [1ubd_B] [1ubd_C]
  • SWISS-PROT database: [P25490]
  • Domain found in 1UBD: [ZnF_C2H2 ] by SMART

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