1UIC Hydrolase date Nov 26, 1996
title Analysis Of The Stabilization Of Hen Lysozyme With The Helix Dipole And Charged Side Chains
authors H.Motoshima, T.Ohmura, T.Ueda, T.Imoto
compound source
Molecule: Lysozyme
Chain: A
Ec: 3.2.1.17
Engineered: Yes
Mutation: Yes
Organism_scientific: Gallus Gallus
Organism_common: Chicken
Organism_taxid: 9031
Gene: Hen Lysozyme
Expression_system: Saccharomyces Cerevisiae
Expression_system_common: Baker'S Yeast
Expression_system_taxid: 4932
Expression_system_strain: Saccharomyces Cerevisiae
Expression_system_vector_type: Yep
Expression_system_vector: Pam82
Expression_system_gene: Hen Lysozyme
symmetry Space Group: P 43 21 2
R_factor 0.169 R_Free NULL
crystal
cell
length a length b length c angle alpha angle beta angle gamma
79.560 79.560 37.840 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.95 Å
ligand
enzyme Hydrolase E.C.3.2.1.17 BRENDA
related structures by homologous chain: 1UID, 1UIE
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceAnalysis of the stability of mutant lysozymes at position 15 using X-ray crystallography., Ohmura T, Ueda T, Motoshima H, Tamura T, Imoto T, J Biochem (Tokyo) 1997 Sep;122(3):512-7. PMID:9348077
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (24 Kb) [Save to disk]
  • Biological Unit Coordinates (1uic.pdb1.gz) 22 Kb
  • CSU: Contacts of Structural Units for 1UIC
  • Likely Quarternary Molecular Structure file(s) for 1UIC
  • Structure Factors (63 Kb)
  • Retrieve 1UIC in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1UIC from S2C, [Save to disk]
  • Re-refined 1uic structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1UIC in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1UIC
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 1UIC, from MSDmotif at EBI
  • Genome occurence of 1UIC's fold from GeneCensus
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1uic__, region [Jmol] [rasmolscript] [script source]
  • Fold representative 1uic from FSSP and Dali (Families of Structurally Similar Proteins)
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1uic] [1uic_A]
  • SWISS-PROT database: [P00698]
  • Domain organization of [LYSC_CHICK] by SWISSPFAM
  • Domain found in 1UIC: [LYZ1 ] by SMART
  • Other resources with information on 1UIC
  • Community annotation for 1UIC at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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